BLASTN 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BA0AB007C07LP1|AL425665
(754 letters)
Database: Klactis 3X assemblage 11/02
1807 sequences; 10,358,551 total letters
Searching....done
Score E
Sequences producing significant alignments: (bits) Value
3x_Contig1424 1356 0.0
>3x_Contig1424
Length = 9842
Score = 1356 bits (683), Expect = 0.0
Identities = 740/755 (98%), Gaps = 4/755 (0%)
Strand = Plus / Minus
Query: 1 tgtattaagcaatgagagaatatttagaaattgatcctcgtgttcaagttttaaacgatc 60
||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 6067 tgtatcaagcaatgagagaatatttagaaattgatcctcgtgttcaagttttaaacgatc 6008
Query: 61 gttgtgaagtatttttagagtttttcgatatatgtgtagattcaattgctgaacggaata 120
||||| ||||||||||||||||||||||||||||||| ||||||||||||||||||||||
Sbjct: 6007 gttgtaaagtatttttagagtttttcgatatatgtgtcgattcaattgctgaacggaata 5948
Query: 121 tggcccgtatcacctggtggtttattacaatcatattcatcagcgttttgatttccattg 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 5947 tggcccgtatcacctggtggtttattacaatcatattcatcagcgttttgatttccattg 5888
Query: 181 tggaaattttggtacgctatttcattattaagaaacacactggtacataattacgaatga 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 5887 tggaaattttggtacgctatttcattattaagaaacacactggtacataattacgaatga 5828
Query: 241 gaaaatgttgcggtatataatgtgcaagctttatacatttcatttctttgacaccataca 300
||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||
Sbjct: 5827 caaaatgttgcggtatataatgtgcaagctttatacatttcatttctttg-caccatac- 5770
Query: 301 ttgttgacggatttaccatcaggaatggtaaagaaaacatatggctttccatcctttggt 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 5769 ttgttgacggatttaccatcaggaatggtaaagaaaacatatggctttccatcctttggt 5710
Query: 361 agagagttcaatctgaagtaaccctttgctctcgaactgaatgatgtgaccaaccttcat 420
||||||| ||||||||||||||||||| ||||||||||||||||||| ||||||||||||
Sbjct: 5709 agagagtccaatctgaagtaacccttt-ctctcgaactgaatgatgtcaccaaccttcat 5651
Query: 421 gtctttaacatttaaatsagcgtgaggtg-agtgtggaattcagttttaggagttaggaa 479
||||||||||||||||| ||||| || || ||||||||||||||||||||||||||||||
Sbjct: 5650 gtctttaacatttaaatcagcgtaagctgtagtgtggaattcagttttaggagttaggaa 5591
Query: 480 gtcttcgaagttttcgccttcttccaacttatctttagagattaagtggtcaaagtcaac 539
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 5590 gtcttcgaagttttcgccttcttccaacttatctttagagattaagtggtcaaagtcaac 5531
Query: 540 caaatcagcttcgaccttgtcgtcggtatcagccaaccaggktaacttgaatttagtggt 599
||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||
Sbjct: 5530 caaatcagcttcgaccttgtcgtcggtatcagccaaccaggttaacttgaatttagtggt 5471
Query: 600 cttgaagtcaccttccaaatgaagtttagcgttgaaggaaccatcatcgtttttcttggt 659
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 5470 cttgaagtcaccttccaaatgaagtttagcgttgaaggaaccatcatcgtttttcttggt 5411
Query: 660 gatgatagcattaccccagtccattagagttacctcttcaccttcagataacaatttagc 719
|||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||
Sbjct: 5410 gatgatagcattaccccagtccattagagtaacctcttcaccttcagataacaatttagc 5351
Query: 720 atcttcttcgtcaataactatatccttgtagtaga 754
|||||||||||||||||||||||||||||||||||
Sbjct: 5350 atcttcttcgtcaataactatatccttgtagtaga 5316
Database: Klactis 3X assemblage 11/02
Posted date: Nov 27, 2002 12:23 PM
Number of letters in database: 10,358,551
Number of sequences in database: 1807
Lambda K H
1.38 0.711 1.31
Gapped
Lambda K H
1.38 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 6157
Number of Sequences: 1807
Number of extensions: 6157
Number of successful extensions: 62
Number of sequences better than 1.0e-20: 1
length of query: 754
length of database: 10,358,551
effective HSP length: 16
effective length of query: 738
effective length of database: 10,329,639
effective search space: 7623273582
effective search space used: 7623273582
T: 0
A: 40
X1: 6 (11.9 bits)
X2: 15 (29.8 bits)
S1: 12 (24.3 bits)
S2: 50 (99.8 bits)